Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015830595.1_cds_XP_016504247.1_17710
CDS Infomation

[gene=LOC107822239] [db_xref=GeneID:107822239] [protein=phosphomevalonate kinase-like] [protein_id=XP_016504247.1] [location=complement(join(188780..189049,189462..189584,190841..191068,191834..191938,193469..193855,194921..194973,195085..195194,195393..195490,195643..195793,195962..195969))] [gbkey=CDS]
Sequence

ATGGCTGTCGTGGCCTCTGCTCCTGGAAAGGTTCTAATGACTGGAGGTTATCTTGTTTTG
GAGAGGCCAAATGCTGGTATTGTACTGAGTACAAATGCTCGTTTTTATGCTATTGTGAAG
CCACTTTACGAGGAAATTAAACCTGAAAGTTGGGCATGGGCATGGGCAGATGTTAAATTG
ACTTCTCCTCAGATGGCCAGAGAAACTATGTACAAATTGTCTCTTAAGCATTTAAAACTT
CAAGCTGTCTCTTCCAGTGAATCAAGAAACCCCTTTGTAGAACATGCAGTGGAATATGCC
ATAGCAGCAGCCCATGCAACATTTGACAAAGATAAGAAGGATATATTACATAAACTACTT
CTGAGAGGTCTTGATATAACAATCTTGGGTTGCAATGAGTTCTATTCGTATCGGAATCAG
ATTGAAGCGCGTGGGCTCCCTCTTACACCTGAGTCATTGGCTTCCCTTCCACCTTTTACC
TCAATCACTTTTAATGCAAAAGATTCAATTGGAGAAAATCGGAAGCCTGAAGTTGCAAAA
ACTGGATTGGGGTCATCAGCAGCTATGACAACAGCAGTTGTTGCTGCTTTGCTTCATTAT
CTTGGTGTTGTTAATCTCTCCTCTTTCACTGAGGATCAATACCACGGAAGGAAAGATGCT
AGTAATCTTGATATTGTTCATGTGATAGCTCAAACTGCCCACTGCATTGCACAGGGTAAA
GTTGGCAGCGGGTTTGACGTTAGTTCTGCAGTTTATGGCAGCCAACGCTATGTGCGGTTT
TCACCTGAAGTGCTTTCTTCTGCTCAGAATGCAGGTATGGCAACACCACTAACAGAAGTC
ATTGATGATGTCCTAAAAGCCAAGTGGGACCATGAGAGGACCAAGTTTTCATTGCCTCCA
CTGATGACTCTATTACTTGGAGAACCAGGCAGTGGAGGATCTTCTACCCCATCAATGGTT
GGTGCTGTTAAGAGATGGCAGAAATCTGATCCTCAGAGTTCTCTAGAAACATGGAGAAAG
TTGTCAGAAGGAAACTCTGCCCTGGAAATGCACCTTAATACCTTATGTAAGTTGGCAGAA
AGGAACTACAATGTTTATGAATGCGTCATCAATGCCTGCAGCCTGCTTACTGCAGAAAAG
TGGCCTGAAAGAGCAAACGAACCAAGTCAAGCAGAAATTGTTAAAGAGTTATTAGGAGCC
CGAGAGGCCATGCTTGGAATCAGGTATTATATGCGTAAAATGGGAGAGGCTGCAGGAATT
CCGATAGAACCTGAATCACAAACTCACCTTCTGGATACAACGATGAGTATGGAGGGAGTT
TTGTTGGCTGGTGTTCCTGGTGCTGGTGGATTTGATGCAGTCTTTGCTGTCACTTTGGGG
GCTTCAAGCAAAAATGTTACAAAAGCTTGGAGTTCGCTCAATGTTCTTGCTATGCTAGTG
ACAGAAGATCCTCGTGGTTTGTCTTTGGAAGACAATGATCCTCGGGCAAAGGAAATCACT
GCAGCTGTTTCTGCAATCCAACTTCAGTCATGA

Peptide Sequence

PEP ID

XP_016504247.1
PEP Infomation

PREDICTED: phosphomevalonate kinase-like [Nicotiana tabacum]
Sequence

MAVVASAPGKVLMTGGYLVLERPNAGIVLSTNARFYAIVKPLYEEIKPESWAWAWADVKL
TSPQMARETMYKLSLKHLKLQAVSSSESRNPFVEHAVEYAIAAAHATFDKDKKDILHKLL
LRGLDITILGCNEFYSYRNQIEARGLPLTPESLASLPPFTSITFNAKDSIGENRKPEVAK
TGLGSSAAMTTAVVAALLHYLGVVNLSSFTEDQYHGRKDASNLDIVHVIAQTAHCIAQGK
VGSGFDVSSAVYGSQRYVRFSPEVLSSAQNAGMATPLTEVIDDVLKAKWDHERTKFSLPP
LMTLLLGEPGSGGSSTPSMVGAVKRWQKSDPQSSLETWRKLSEGNSALEMHLNTLCKLAE
RNYNVYECVINACSLLTAEKWPERANEPSQAEIVKELLGAREAMLGIRYYMRKMGEAAGI
PIEPESQTHLLDTTMSMEGVLLAGVPGAGGFDAVFAVTLGASSKNVTKAWSSLNVLAMLV
TEDPRGLSLEDNDPRAKEITAAVSAIQLQS

Transcript Sequence

Gene sequence data has not been registered.